Bioinformatic Tools

Literature-based, manually-curated database of PCR primers for the detection of antibiotic resistance genes in various environments
Adrian Gorecki, Przemyslaw Decewicz, Mikolaj Dziurzynski, Anna Janeczko, Lukasz Drewniak, Lukasz Dziewit
Water Research, 161, 211-221 (2019)
DOI
Literature-based, manually-curated database of PCR primers
A literature-based, manually-curated database of PCR primers for the detection of antibiotic resistance genes is comprised of hundreds …
LCPDb
Alphaproteobacteria (pro)phages Database
This projects aims to construct interactive website database for all known and publicly available active phages and manually verified …
Phages Prophages Sinorhizobium phages Paracoccus prophages
Stress response genes database
A manually curated database of stress response genes was created to annotate genes of plasmid DNA extracted from metaplasmidomes from …
Application of metagenomic analyses in dentistry as a novel strategy enabling complex insight into microbial diversity of the oral cavity
Aleksandra Burczynska, Lukasz Dziewit, Przemyslaw Decewicz, Izabela Struzycka, Marta Wroblewska
Polish Journal of Microbiology, 66, 9-15 (2017)
DOI
Metabolic modelling reveals the specialization of secondary replicons for niche adaptation in Sinorhizobium meliloti
George C. diCenzo, Alice Checcucci, Marco Bazzicalupo, Alessio Mengoni, Carlo Viti, Lukasz Dziewit, Turlough M. Finan, Marco Galardini, Marco Fondi
Nature Communications, 7, 12219 (2016)
DOI