MAISEN

MAISEN is a web tool dedicated to the annotation of bacterial and archeal nucleotide sequences. It allows you to browse structural and functional annotation hits from various databases in one place. You can either uploaded annotated GenBank file or a FASTA file that will undergo a simple structural annotation (prodigal, tRNAscan-SE, ARAGORN, PHANOTATE). Proteins encoded in your sequence will be then searched against a set of reference databases (NBCI non-redundant protein database, UniProtKB/Swiss-Prot database,  Conserved Domains database) in order to provide you with a precomputed similarity searches for curating automatic annotations of your sequence.