Research-Article

Computational pipeline for sustainable enzyme discovery through (re)use of metagenomic data
Karol Ciuchcinski, Anna-Karina Kaczorowska, Daria Biernacka, Sebastian Dorawa, Tadeusz Kaczorowski, Younginn Park, Karol Piekarski, Michal Stanowski, Takao Ishikawa, Runar Stokke, Ida Helene Steen, Lukasz Dziewit
Journal of Environmental Management, 382, 125381 (2025)
DOI
Genome-guided development of a bacterial two-strain system for low-temperature soil biocementation
Karol Ciuchcinski, Grzegorz Czerwonka, Przemyslaw Decewicz, Zofia Godlewska, Katarzyna Misiolek, Katarzyna Zegadlo, Michal Styczynski, Lukasz Dziewit
Applied Microbiology and Biotechnology, 109, 66 (2025)
Dataset DOI
Engineered magnetic particles derived from steelmaking dust for phosphorus recovery and extracellular DNA removal from municipal wastewater
Mateusz Skalny, Jakub Czeremuga, Anna Rokowska, Marta Gajewska, Artur Blachowski, Mateusz Marzec, Krystian Sokolowski, Lukasz Dziewit, Tomasz Bajda
Journal of Environmental Management, 380, 124830 (2025)
DOI
The skin mycobiome of patients with atopic dermatitis and healthy volunteers: A case-control study
Magdalena Zychowska, Zofia Bakula, Przemyslaw Decewicz, Anita Hryncewicz-Gwozdz, Mariusz Dylag, Alina Jankowska-Konsur, Jan Gawor, Robert Gromadka, Anna Zaczek, Tomasz Jagielski
Experimental Dermatology, 34, e70085 (2025)
DOI
Comparative analysis of Legionella lytica genome identifies specific metabolic traits and virulence factors
Piotr Koper, Jakub Wysokinski, Kamil Zebracki, Przemyslaw Decewicz, Lukasz Dziewit, Michal Kalita, Marta Palusinska-Szysz, Andrzej Mazur
Scientific Reports, 15, 5554 (2025)
DOI
Genome-wide comparative analysis of clinical and environmental strains of the opportunistic pathogen Paracoccus yeei (Alphaproteobacteria)
Magdalena Szuplewska, Dorota Sentkowska, Robert Lasek, Przemyslaw Decewicz, Mateusz Halucha, Lukasz Funk, Cora Chmielowska, Dariusz Bartosik
Frontiers in Microbiology, 10, 1483110 (2024)
DOI
Landscape of the metaplasmidome of deep-sea hydrothermal vents located at Arctic Mid-Ocean Ridges in the Norwegian–Greenland Sea: ecological insights from comparative analysis of plasmid identification tools
Karol Ciuchcinski, Runar Stokke, Ida H. Steen, Lukasz Dziewit
FEMS Microbiology Ecology, 100, fiae124 (2024)
DOI
Nanoscale surface defects of goethite governing DNA adsorption process and formation of the Goethite-DNA conjugates
Mateusz Skalny, Anna Rokowska, Michal Szuwarzynski, Marta Gajewska, Lukasz Dziewit, Tomasz Bajda
Chemosphere, 362, 142602 (2024)
DOI
Effect of composting and storage on the microbiome and resistome of cattle manure from a commercial dairy farm in Poland
Magdalena Zalewska, Aleksandra Błażejewska, Mateusz Szadziul, Karol Ciuchcinski, Magdalena Popowska
Environmental Science and Pollution Research, 31, 30819-30835 (2024)
DOI
Diversity of antibiotic resistance gene variants at subsequent stages of the wastewater treatment process revealed by a metagenomic analysis of PCR amplicons
Adrian Gorecki, Piotr Ostapczuk, Lukasz Dziewit
Frontiers in Genetics, 14, 1334646 (2024)
DOI